BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G07SP1|AL425924
(778 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1534 1542 0.0
>3x_Contig1534
Length = 9979
Score = 1542 bits (778), Expect = 0.0
Identities = 778/778 (100%)
Strand = Plus / Plus
Query: 1 gatctaagattcgaaaaggaccctactgcaggaaactaggtttgaagttgatgccacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5081 gatctaagattcgaaaaggaccctactgcaggaaactaggtttgaagttgatgccacaaa 5140
Query: 61 tggaaaccctgtgttagaatatctatagacactgaattgtacattcacattgttcattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5141 tggaaaccctgtgttagaatatctatagacactgaattgtacattcacattgttcattta 5200
Query: 121 tatatgtaaaaactccaattaacgctactttgtatcaaataagcgtttccctgatatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5201 tatatgtaaaaactccaattaacgctactttgtatcaaataagcgtttccctgatatata 5260
Query: 181 tcacacttaaaacatgcttcgtgggggtacgctataatctaaaatcctgaactacggttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5261 tcacacttaaaacatgcttcgtgggggtacgctataatctaaaatcctgaactacggttc 5320
Query: 241 tgaaaggctccagccgcattatcgccatttccttagtgagtttttgacatatttcatcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5321 tgaaaggctccagccgcattatcgccatttccttagtgagtttttgacatatttcatcac 5380
Query: 301 atactttaataagaaaatctcagcattcagaaatatagtgtaccacatcaacacaagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5381 atactttaataagaaaatctcagcattcagaaatatagtgtaccacatcaacacaagaag 5440
Query: 361 atggatgaagtaaaccagacattcaaaacgtgggctgtaaccatctactatataacaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5441 atggatgaagtaaaccagacattcaaaacgtgggctgtaaccatctactatataacaagt 5500
Query: 421 tggtaagctcgctccgtcatatatgtctttgcagcccaggcataatgagaggggccatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5501 tggtaagctcgctccgtcatatatgtctttgcagcccaggcataatgagaggggccatca 5560
Query: 481 actgggaataggtgtggtagcatctagtacatatgtgccattcaatgaatcaaataatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5561 actgggaataggtgtggtagcatctagtacatatgtgccattcaatgaatcaaataatat 5620
Query: 541 agagaatgacaatgagcattgggctctctcttcactcaagaaaagagatagaatgtactt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5621 agagaatgacaatgagcattgggctctctcttcactcaagaaaagagatagaatgtactt 5680
Query: 601 tagggatatgcgtgtattacaggagggaaattccagggaatcacatacgagtgatttggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5681 tagggatatgcgtgtattacaggagggaaattccagggaatcacatacgagtgatttggg 5740
Query: 661 tatttataataccgacatggaagaagttccgtatcctgtggaaagacaaggcttttgcaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5741 tatttataataccgacatggaagaagttccgtatcctgtggaaagacaaggcttttgcaa 5800
Query: 721 ccaagtactgcgcaaactggacaaaggagatatattgaaggatgtcgaactgcgacct 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5801 ccaagtactgcgcaaactggacaaaggagatatattgaaggatgtcgaactgcgacct 5858
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5439
Number of Sequences: 1807
Number of extensions: 5439
Number of successful extensions: 22
Number of sequences better than 1.0e-20: 1
length of query: 778
length of database: 10,358,551
effective HSP length: 16
effective length of query: 762
effective length of database: 10,329,639
effective search space: 7871184918
effective search space used: 7871184918
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)